Anchored HTML File of EIDs

	WEB-based GEne SeT AnaLysis Toolkit

	*Translating gene lists into biological insights...*

User data and parameters: User data: textAreaUpload.txt, Organism: hsapiens, Id Type: ensembl_gene_stable_id, Ref Set: entrezgene, Significance Level: Top10, Statistics Test: Hypergeometric, MTC: BH, Minimum: 2

The results for each enriched gene sets are listed in this table.
For each gene set, the first row lists database name, gene set name , and corresponding gene set ID.
The second row lists the following statistics:

C: the number of reference genes in the category
O: the number of genes in the gene set and also in the category
E: the expected number in the category
R: ratio of enrichment
rawP: p value from hypergeometric test
adjP: p value adjusted by the multiple test adjustment

Finally, genes in the pathway are listed. For each gene, the table lists the user uploaded ID and value (optional), Entrez ID, Ensembl Gene Stable ID, Gene symbol, and description. Ensembl Gene Stable ID and Entrez Gene ID are linked to the Ensembl and Entrez Gene databases, respectively.

Database:KEGG pathway Name:Endocytosis ID:04144
C=201; O=2; E=0.17; R=11.60; rawP=0.0129; adjP=0.0156
Index	UserID	Value	Gene Symbol	Gene Name	EntrezGene	Ensembl
1	ENSG00000198873	NA	GRK5	G protein-coupled receptor kinase 5	2869	ENSG00000198873
2	ENSG00000100077	NA	ADRBK2	adrenergic, beta, receptor kinase 2	157	ENSG00000100077

Database:KEGG pathway Name:Chemokine signaling pathway ID:04062
C=189; O=2; E=0.16; R=12.33; rawP=0.0115; adjP=0.0156
Index	UserID	Value	Gene Symbol	Gene Name	EntrezGene	Ensembl
1	ENSG00000198873	NA	GRK5	G protein-coupled receptor kinase 5	2869	ENSG00000198873
2	ENSG00000100077	NA	ADRBK2	adrenergic, beta, receptor kinase 2	157	ENSG00000100077

Database:KEGG pathway Name:Metabolic pathways ID:01100
C=1130; O=4; E=0.97; R=4.13; rawP=0.0156; adjP=0.0156
Index	UserID	Value	Gene Symbol	Gene Name	EntrezGene	Ensembl
1	ENSG00000169255	NA	B3GALNT1	beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)	8706	ENSG00000169255
2	ENSG00000172331	NA	BPGM	2,3-bisphosphoglycerate mutase	669	ENSG00000172331
3	ENSG00000143179	NA	UCK2	uridine-cytidine kinase 2	7371	ENSG00000143179
4	ENSG00000147408	NA	CSGALNACT1	chondroitin sulfate N-acetylgalactosaminyltransferase 1	55790	ENSG00000147408

WebGestalt is currently developed and maintained by Jing Wang and Bing Zhang at the Zhang Lab. Other people who have made significant contribution to the project include Dexter Duncan, Stefan Kirov, Zhiao Shi, and Jay Snoddy.

Funding credits: NIH/NIAAA (U01 AA016662, U01 AA013512); NIH/NIDA (P01 DA015027); NIH/NIMH (P50 MH078028, P50 MH096972); NIH/NCI (U24 CA159988); NIH/NIGMS (R01 GM088822).